This has happened to me a number of times but I cannot seem to isolate what causes it, as it seems like it only happens infrequently and sporadically.
Recently I loaded a saved render preset, when the dialog box popped up to ask which of the saved settings I wanted to import, I ONLY selected the Environment option, and nothing else. After rendering, I went to edit the CXR file and noticed that all of my lightmix setup was stripped. In the 3dmax file, under the Render Elements section, all of my Lightselect groups now contain nothing but endless rows of "deleted."
Needless to say this is frustrating as I've spent quite a bit of time setting up my Lightmix, and I have different scenes in this model that all require different lightmix settings that don't allow me to easily bake them into the model.
What is causing this to happen and how can I avoid it in the future?