LightMix sometimes can be used to do day > night renders, but if there are some problems with that, then we cannot do anything about it. Generally it is intended for more subtle changes in light intensity and color.
You are getting different results with IR and regular render, because IR is using slightly different render settings. Most probably you simply got more passes faster with IR, and less passes with regular render, that's why the overall quality is better, but the problematic areas are even worse.